Malaysian Node of the Human Variome Project Database
LDLR (low density lipoprotein receptor)
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Full data view for gene LDLR
The variants shown are described using the NM_000527.4 transcript reference sequence.
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Effect
: The variant's effect on the function of the gene/protein, displayed in the format 'R/C'. R is the value reported by the source (publication, submitter) and this classification may vary between records. C is the value concluded by the curator. Note that in some database the curator uses Summary records to give details on the classification of the variant.Values used: '+' indicating the variant affects function, '+?' probably affects function, '-' does not affect function, '-?' probably does not affect function, '?' effect unknown, '.' effect was not classified.
Exon
: Number of exon/intron containing variant; 2 = exon 2, 12i = intron 12, 2i_7i = exons 3 to 7, 8i_9 = border intron 8/exon 9.
DNA change (cDNA)
: Description of variant at DNA level, based on a coding DNA reference sequence (following HGVS recommendations); e.g. c.123C>T, c.123_145del, c.123_126dup.
Published as
: Variant as originally reported (e.g. 521delT); listed only when different from "DNA change". Variants seen in animal models, tested in vitro, predicted from RNA analysis, etc. are described between brackets like c.(456C>G).
RNA change
: Description of variant at RNA level (following HGVS recommendations).
r.123c>u
r.? = unknown
r.(?) = RNA not analysed but probably transcribed copy of DNA variant
r.spl? = RNA not analysed but variant probably affects splicing
r.(spl?) = RNA not analysed but variant may affect splicing
r.0? = change expected to abolish transcription
Protein
: Description of variant at protein level (following HGVS recommendations).
p.(Arg345Pro) = change predicted from DNA (RNA not analysed)
p.Arg345Pro = change derived from RNA analysis
p.? = unknown effect
p.0? = probably no protein produced
GVS function
: The functional annotation of this position from the Genome Variation Server.
All options:
intergenic
near-gene-5
utr-5
start-lost
coding
non-coding-exon
coding-near-splice
non-coding-exon-near-splice
coding-synonymous
coding-synonymous-near-splice
codingComplex
codingComplex-near-splice
frameshift
frameshift-near-splice
missense
missense-near-splice
splice-5
splice
non-coding-intron-near-splice
intron
splice-3
stop-gained
stop-gained-near-splice
stop-lost
stop-lost-near-splice
utr-3
near-gene-3
Clinical classification
: Clinical classification of variant
Allele
: On which allele is the variant located? Does not necessarily imply inheritance! 'Paternal' (confirmed or inferred), 'Maternal' (confirmed or inferred), 'Parent #1' or #2 for compound heterozygosity without having screened the parents, 'Unknown' for heterozygosity without having screened the parents, 'Both' for homozygozity.
DNA change (genomic) (hg38)
: Description of variant at DNA level, based on the genomic DNA reference sequence (following HGVS recommendations).
g.12345678C>T
g.12345678_12345890del
g.12345678_12345890dup
Published as
: Variant as originally reported (e.g. 521delT); listed only when different from "DNA change". Variants seen in animal models, tested in vitro, predicted from RNA analysis, etc. are described between brackets like c.(456C>G).
Reference
: Reference to publication describing the variant, including links to OMIM (when available), PubMed or or other source, e.g. "den Dunnen ASHG2003 P2346".
DB-ID
: Database ID of variant, grouping multiple observations of the same variant together, starting with the HGNC gene symbol, followed by an underscore (_) and a six digit number (e.g. DMD_012345). _000000 is used for variants where DNA was not analysed (change predicted from RNA analysis), variants seen in animal models or variants not seen in humans but functionally tested in vitro.
dbSNP ID
: The dbSNP ID.
Frequency
: Frequency in which the variant was found; e.g 5/760 chromosomes (in 5 of 760 chromosomes tested), 1/33 patients (in 1 of 33 patients analysed in study), 0.05 controls (in 5% of control cases tested).
Variant remarks
: Remarks regarding the variant described, e.g. germline mosaicism in mother, 345 kb deletion, muscle RNA analysed, not in 200 control chromosomes tested, on founder haplotype, etc.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
Reference
: Reference to publication describing the individual/family, possibly giving more phenotypic details than listed in this database entry, including link to PubMed or other source, e.g. "den Dunnen ASHG2003 P2346". References in the "Country:City" format indicate that the variant was submitted directly to this database by the laboratory indicated.
Gender
: The gender of the reported individual.
All options:
? = Unknown
F = Female
M = Male
rF = Raised as female
rM = Raised as male
Geographic origin
: The geographic origin of the individual (country and/or region); Belgium = individual's origin is Belgium, (France) = reported by laboratory in France, individual's origin not sure.
Ethnic origin
: The ethnic origin of the individual; e.g. African, Caucasian, gypsy, jew (Ashkenazi).
Population
: Additional information on the individual's population.
Remarks
: Remarks about the individual.
Microattribution
: An acknowledgment to data contributor to this database.
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
95 entries on 1 page. Showing entries 1 - 95.
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Legend
How to query
Effect
Exon
DNA change (cDNA)
Published as
RNA change
Protein
GVS function
Clinical classification
Allele
DNA change (genomic) (hg38)
Published as
Reference
DB-ID
dbSNP ID
Frequency
Variant remarks
Template
Technique
Disease
Reference
Gender
Geographic origin
Ethnic origin
Population
Remarks
Microattribution
Panel size
Owner
+/.
-
c.-152C>T
-
r.(=)
p.(=)
-
-
Unknown
g.11089397C>T
CT at −152
K L Khoo et al. (2000)
,
ClinVar
LDLR_000037
-
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
2
c.77_78del
-
r.(?)
p.(Arg26Metfs*25)
-
ClinVar
Unknown
g.11100232_11100233del
GA deleted at 77
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000038
rs879254400
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
2
c.81C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11100236C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000002
rs2228671
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
2
c.81C>T
p.Cys27Cys
r.(=)
p.(=)
-
Benign
Unknown
g.11100236C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000002
rs2228671
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
./.
2i
c.190+4A>T
-
r.spl?
p.?
-
ClinVar
Unknown
g.11100349A>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000023
rs769446356
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
2i
c.190+56G>A
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11100401G>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000003
rs3745677
3/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
2i
c.190+58C>T
-
r.(=)
p.(=)
-
-
Unknown
g.11100403C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
LDLR_000004
rs3745678
7/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
2i
c.190+58C>T
-
r.(=)
p.(=)
-
-
Unknown
g.11100403C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000004
rs3745678
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
3
c.268G>A
-
r.(?)
p.(Asp90Asn)
-
ClinVar
Unknown
g.11102741G>A
GAT>AAT at 268
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000039
rs749038326
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
3
c.268G>A
-
r.(?)
p.(Asp90Asn)
-
ClinVar
Unknown
g.11102741G>A
D69N
M Azian et ai. (2006)
,
dbSNP
,
ClinVar
LDLR_000039
rs749038326
1/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-?/.
3
c.300C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11102773C>T
-
Alyaa Al-Khateeb et al. (2011)
dbSNP
LDLR_000005
rs766709484
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
3
c.301G>A
-
r.(?)
p.(Glu101Lys)
-
Pathogenic/Likely pathogenic
Unknown
g.11102774G>A
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000024
rs144172724
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
./.
3
c.301G>A
-
r.(?)
p.(Glu101Lys)
-
ClinVar
Unknown
g.11102774G>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000024
rs144172724
11/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
3
c.301G>A
-
r.(?)
p.(Glu101Lys)
-
ClinVar
Both (homozygous)
g.11102774G>A
p.Glu101Lys in exon 3
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000024
rs144172724
3/10
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
3i
c.313+1G>A
-
r.spl?
p.?
-
-
Unknown
g.11102787G>A
-
(OMIM 0054)
,
ClinVar
LDLR_000031
-
1/40
-
DNA
DHPLC, SEQ
FH
Alyaa Al-Khateeb et al. (2016)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
3i
c.313+1G>A
-
r.spl?
p.?
-
-
Unknown
g.11102787G>A
G>A at 313+1
K L Khoo et al. (2000)
,
ClinVar
,
(OMIM 0054)
LDLR_000031
-
1/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
4
c.344G>A
-
r.(?)
p.(Arg115His)
-
ClinVar
Unknown
g.11105250G>A
CGC>CAC at 344
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000040
rs201102461
2/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
4
c.415G>C
-
r.(?)
p.(Asp139His)
-
ClinVar
Unknown
g.11105321G>C
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000025
rs879254517
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
4
c.415G>C
-
r.(?)
p.(Asp139His)
-
Likely pathogenic
Unknown
g.11105321G>C
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000025
rs879254517
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
4
c.530C>T
-
r.(?)
p.(Ser177Leu)
-
Pathogenic/Likely pathogenic
Unknown
g.11105436C>T
-
Noor Shafina Mohd Nor et al.(2019)
LDLR_000060
rs121908026
-
-
DNA
SEQ-NG-I
FH
Noor Shafina Mohd Nor et al.(2019)
F
Malaysia
Indian
-
Monochorionic diamniotic identical twin
-
2
Nur Aisyah Athirah
+/.
4
c.601G>A
-
r.(?)
p.(Glu201Lys)
-
Likely pathogenic
Unknown
g.11105507G>A
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000026
rs879254589
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+?/.
4
c.601G>A
-
r.(?)
p.(Glu201Lys)
-
ClinVar
Unknown
g.11105507G>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000026
rs879254589
9/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
4
c.660delC
-
r.(?)
p.(Asp221Thrfs*44)
-
-
Unknown
g.11105566delC
c.660delC in exon 4
Kah Lin Khoo et al. (2016)
LDLR_000053
-
1/10
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
5
c.757C>T
-
r.(?)
p.(Arg253Trp)
-
-
Unknown
g.11106627C>T
CGG>TGG at 757
K L Khoo et al. (2000)
,
ClinVar
LDLR_000041
-
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
5
c.757C>T
-
r.(?)
p.(Arg253Trp)
-
-
Unknown
g.11106627C>T
CGG>TGG at 757
K L Khoo et al. (2000)
,
ClinVar
LDLR_000041
-
1/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
5
c.763T>A
-
r.(?)
p.(Cys255Ser)
-
ClinVar
Unknown
g.11106633T>A
-
dbSNP
,
ClinVar
LDLR_000027
rs879254668
4/40
-
DNA
DHPLC, SEQ
FH
Alyaa Al-Khateeb et al. (2016)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
5
c.763T>A
-
r.(?)
p.(Cys255Ser)
-
ClinVar
Unknown
g.11106633T>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000027
rs879254668
10/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
5
c.763T>A
-
r.(?)
p.(Cys255Ser)
-
ClinVar
Both (homozygous)
g.11106633T>A
Cys255Ser in exon 5
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000027
rs879254668
1/10
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
5
c.763T>A
-
r.(?)
p.(Cys255Ser)
-
Likely pathogenic
Unknown
g.11106633T>A
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000027
rs879254668
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
5
c.763T>A
-
r.(?)
p.(Cys255Ser)
-
ClinVar
Both (homozygous)
g.11106633T>A
C234S
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000027
rs879254668
2/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
5
c.763T>A
-
r.(?)
p.(Cys255Ser)
-
ClinVar
Unknown
g.11106633T>A
C234S
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000027
rs879254668
7/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
6
c.829G>A
-
r.(?)
p.(Glu277Lys)
-
-
Unknown
g.11107403G>A
GAG>AAG at 829
K L Khoo et al. (2000)
,
ClinVar
LDLR_000001
-
1
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
F
Malaysia
Indian
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
6
c.910G>A
-
r.(?)
p.(Asp304Asn)
-
ClinVar
Both (homozygous)
g.11107484G>A
Asp304Asn in exon 6
Kah Lin Khoo et al. (2016)
,
dbSNP
,
(OMIM 0008)
,
ClinVar
LDLR_000006
rs121908030
1/10
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
6
c.910G>A
-
r.(?)
p.(Asp304Asn)
-
ClinVar
Unknown
g.11107484G>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
(OMIM 0008)
,
ClinVar
LDLR_000006
rs121908030
7/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
6
c.910G>A
-
r.(?)
p.(Asp304Asn)
-
Pathogenic/Likely pathogenic
Unknown
g.11107484G>A
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000006
rs121908030
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
-/.
6i
c.940+36G>A
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11107550G>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000007
rs13306513
3/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
6i
c.940+36G>A
-
r.(=)
p.(=)
-
Benign
Unknown
g.11107550G>A
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000007
rs13306513
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
6i
c.940+775G>A
-
r.(=)
p.(=)
-
-
Unknown
g.11108289G>A
-
Say-Hean Lye et al. (2013)
,
dbSNP
LDLR_000036
rs2569556
1
-
DNA
SEQ-NG-I, SEQ
FH
Say-Hean Lye et al. (2013)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
6i
c.940+1187G>T
-
r.(=)
p.(=)
-
-
Unknown
g.11108701G>T
-
Livy Alex et al. (2012)
,
dbSNP
LDLR_000035
rs61318752
1/2
-
DNA
SEQ-NG-I
FH
Livy Alex et al. (2012)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
7
c.986G>A
-
r.(?)
p.(Cys329Tyr)
-
ClinVar
Unknown
g.11110697G>A
TGC>TAC at 986
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000045
rs761954844
2/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
7i
c.1060+7C>A
-
r.(=)
p.(=)
-
-
Unknown
g.11110778C>A
c.1060+7T>C
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
LDLR_000008
rs2738442
18/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
7i
c.1060+7C>T
c.1060+7T>C
r.(=)
p.(=)
-
Uncertain significance
Unknown
g.11110778C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000059
rs2738442
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
7i
c.1060+10G>C
-
r.(=)
p.(=)
-
-
Unknown
g.11110781G>C
-
Alyaa Al-Khateeb et al. (2011)
,
ClinVar
LDLR_000009
-
5/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
8
c.1132C>T
-
r.(?)
p.(Gln378*)
-
ClinVar
Unknown
g.11111585C>T
CAG>TAG at 1132
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000046
rs879254802
1/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
8
c.1132C>T
-
r.(?)
p.(Gln378*)
-
ClinVar
Unknown
g.11111585C>T
CAG>TAG at 1132
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000046
rs879254802
1
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
-?/.
8i
c.1186+41T>A
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11111680T>A
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000010
rs536387604
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
9
c.1194C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11113285C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000011
rs13306498
5/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
9
c.1194C>T
p.Ile398Ile
r.(=)
p.(=)
-
Conflicting interpretations of pathogenicity
Unknown
g.11113285C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000011
rs13306498
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
9
c.1216C>T
-
r.(?)
p.(Arg406Trp)
-
-
Unknown
g.11113307C>T
R385W
M Azian et al. (2006)
,
ClinVar
LDLR_000032
-
2/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
9
c.1216C>T
-
r.(?)
p.(Arg406Trp)
-
-
Unknown
g.11113307C>T
-
ClinVar
LDLR_000032
-
1/40
-
DNA
DHPLC, SEQ
FH
Alyaa Al-Khateeb et al. (2016)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
9
c.1241T>G
-
r.(?)
p.(Leu414Arg)
-
ClinVar
Unknown
g.11113332T>G
p.Leu414Arg in exon 9
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000047
rs748554592
1/5
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
9
c.1241T>G
-
r.(?)
p.(Leu414Arg)
-
ClinVar
Unknown
g.11113332T>G
CTG>CGG at 1242
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000047
rs748554592
2/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
9
c.1268T>C
-
r.(?)
p.(Ile423Thr)
-
ClinVar
Unknown
g.11113359T>C
ATC>ACC at 1269
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000042
rs879254849
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
9
c.1284C>G
-
r.(?)
p.(Asn428Lys)
-
ClinVar
Unknown
g.11113375C>G
AAC>AAG at 1283
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000051
rs368708058
1
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
9i
c.1359-30C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11113505C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000012
rs1003723
2/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-?/.
10
c.1411A>G
-
r.(?)
p.(Arg471Gly)
-
ClinVar
Unknown
g.11113587A>G
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000013
rs879254891
17/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
10
c.1413A>G
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11113589A>G
R450R
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000033
rs5930
4/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
10
c.1413A>G
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11113589A>G
c.1413G>A
dbSNP
,
ClinVar
LDLR_000033
rs5930
15/40
-
DNA
DHPLC, SEQ
FH
Alyaa Al-Khateeb et al. (2016)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
10
c.1432G>A
-
r.(?)
p.(Gly478Arg)
-
-
Unknown
g.11113608G>A
GGG>AGG at 1432
K L Khoo et al. (2000)
,
ClinVar
LDLR_000048
-
1/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
10
c.1474G>A
-
r.(?)
p.(Asp492Asn)
-
-
Unknown
g.11113650G>A
GAC>AAC at 1474
K L Khoo et al. (2000)
,
ClinVar
LDLR_000049
-
1/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
10i
c.1586+5G>C
-
r.spl?
p.?
-
ClinVar
Both (homozygous)
g.11113767G>C
c.1586+5 G to C in intron 10
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000055
rs781362878
1/5
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
11
c.1617C>T
p.Pro539Pro
r.(=)
p.(=)
-
Benign
Unknown
g.11116124C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000014
rs5929
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
-/.
11
c.1617C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116124C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000014
rs5929
6/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
11
c.1617C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116124C>T
N510N
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000014
rs5929
4/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
11i
c.1705+56C>T
-
r.(=)
p.(=)
-
Likely benign
Unknown
g.11116268C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000015
rs4508523
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
./.
11i
c.1705+56C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116268C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000015
rs4508523
12/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-?/.
11i
c.1705+112C>G
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116324C>G
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000016
rs879254995
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
11i
c.1705+112C>G
-
r.(=)
p.(=)
-
Likely benign
Unknown
g.11116324C>G
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000016
rs879254995
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
11i
c.1705+117T>G
-
r.(=)
p.(=)
-
-
Unknown
g.11116329T>G
-
Alyaa Al-Khateeb et al. (2011)
LDLR_000019
-
2/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
11i
c.1705+117T>G
-
r.(=)
p.(=)
-
-
Unknown
g.11116329T>G
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000019
-
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
-/.
11i
c.1706-69G>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116790G>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000018
rs7259278
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
11i
c.1706-55A>C
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116804A>C
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000017
rs2738447
6/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
12
c.1706_1845dup
-
r.(?)
p.(Asp616Ilefs*96)
-
-
Unknown
g.11116859_11116998dup
-
Alyaa Al-Khateeb et al. (2011)
LDLR_000028
-
2/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
12
c.1729T>C
-
r.(?)
p.(Trp577Arg)
-
ClinVar
Both (homozygous)
g.11116882T>C
p.Trp576Arg in exon 12
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000056
rs879255000
1/5
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
12i
c.1773C>T
p.Asn591Asn
r.(=)
p.(=)
-
Benign/Likely benign
Unknown
g.11116926C>T
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000020
rs688
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
./.
12
c.1773C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116926C>T
c.1773T>C
dbSNP
,
ClinVar
LDLR_000020
rs688
19/40
-
DNA
DHPLC, SEQ
FH
Alyaa Al-Khateeb et al. (2016)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
12
c.1773C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116926C>T
N570N
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000020
rs688
5/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
12
c.1773C>T
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11116926C>T
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000020
rs688
7/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
13
c.1959T>C
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11120205T>C
V632V
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000021
rs5925
7/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
13
c.1959T>C
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11120205T>C
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000021
rs5925
1/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
14
c.1996_2012del
-
r.(?)
p.(Trp666Profs*45)
-
ClinVar
Unknown
g.11120378_11120394del
c.1996_2012del17
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000030
rs879255104
4/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
14
c.2050G>A
-
r.(?)
p.(Ala684Thr)
-
ClinVar
Unknown
g.11120432G>A
GCC>ACC at 2048
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000044
rs774730452
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
14
c.2087G>A
-
r.(?)
p.(Cys696Tyr)
-
ClinVar
Unknown
g.11120469G>A
TGC>TAC at 2087
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000043
rs879255134
1/9
-
DNA
DGGE, PCR
FH
K L Khoo et al. (2000)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
./.
14
c.2100C>G
-
r.(?)
p.(Asp700Glu)
-
ClinVar
Unknown
g.11120482C>G
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000029
rs759858813
5/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
14
c.2108_2114dup
-
r.(?)
p.(Arg706Alafs*13)
-
ClinVar
Unknown
g.11120490_11120496dup
TGCTGGCins2108
K L Khoo et al. (2000)
,
dbSNP
,
ClinVar
LDLR_000050
rs879255141
1/10
-
DNA
DGGE, PCR
F8
K L Khoo et al. (2000)
F
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
14
c.2132G>A
-
r.(?)
p.(Cys711Tyr)
-
Likely pathogenic
Unknown
g.11120514G>A
-
J K Chahil et al.(2012)
LDLR_000052
rs879255145
-
-
DNA
PCR, SEQ
FH
J K Chahil et al.(2012)
F
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+?/.
14
c.2132G>A
-
r.(?)
p.(Cys711Tyr)
-
ClinVar
Both (homozygous)
g.11120514G>A
Cys711Tyr in exon 14
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000052
rs879255145
3/10
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
14
c.2132G>A
-
r.(?)
p.(Cys711Tyr)
-
ClinVar
Both (homozygous)
g.11120514G>A
Cys711Tyr in exon 14
Kah Lin Khoo et al. (2016)
,
dbSNP
,
ClinVar
LDLR_000052
rs879255145
1
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
M
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
14
c.2132G>A
-
r.(?)
p.(Cys711Tyr)
-
Likely pathogenic
Both (homozygous)
g.11120514G>A
-
J K Chahil et al.(2012)
LDLR_000052
rs879255145
-
-
DNA
PCR, SEQ
FH
J K Chahil et al.(2012)
M
Malaysia
Malay
-
-
-
2
Nur Aisyah Athirah
-?/.
15
c.2209A>G
-
r.(?)
p.(Arg737Gly)
-
ClinVar
Both (homozygous)
g.11123242A>G
R716G
M Azian et al. (2006)
,
dbSNP
,
ClinVar
LDLR_000058
rs879255165
1/33
-
DNA
DGGE, PCR
FH
M Azian et al. (2006)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
-/.
15
c.2232A>G
-
r.(=)
p.(=)
-
ClinVar
Unknown
g.11123265A>G
-
Alyaa Al-Khateeb et al. (2011)
,
dbSNP
,
ClinVar
LDLR_000022
rs5927
5/147
-
DNA
DHPLC, MLPA, PCR
FH
Alyaa Al-Khateeb et al. (2011)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
15
c.2232A>G
p.Arg744Arg
r.(=)
p.(=)
-
Benign
Unknown
g.11123265A>G
-
{DOI:Nor Idahriani Muhd Nor:10.35119/MYJO.V1I2.18}
LDLR_000022
rs5927
-
-
DNA
DHPLC, PCR, SEQ
FH
Nor Idahriani Muhd Nor
-
Malaysia
Malay
-
-
-
1
Nur Aisyah Athirah
+/.
15i
c.2311+1G>T
-
r.spl?
p.?
-
-
Both (homozygous)
g.11123345G>T
c.2311+1 G to T in intron 15
Kah Lin Khoo et al. (2016)
,
ClinVar
LDLR_000057
-
1/2
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
M
Malaysia
Chinese
-
-
-
1
Nuur Athirah Binti Mohd Daud
+?/.
15i
c.2312-1679T>C
-
r.(=)
p.(=)
-
-
Unknown
g.11126329T>C
-
Livy Alex et al. (2012)
,
dbSNP
LDLR_000034
rs10422244
1/2
-
DNA
SEQ-NG-I
FH
Livy Alex et al. (2012)
-
Malaysia
-
-
-
-
1
Nuur Athirah Binti Mohd Daud
+/.
16
c.2389G>A
-
r.(?)
p.(Val797Met)
-
-
Unknown
g.11128085G>A
Val797Met in exon 16
Kah Lin Khoo et al. (2016)
,
ClinVar
LDLR_000054
-
1/10
-
DNA
MLPA, SEQ
FH
Kah Lin Khoo et al. (2016)
F
Malaysia
Malay
-
-
-
1
Nuur Athirah Binti Mohd Daud
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