### LOVD-version 3000-290 ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = PDGFRA) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "PDGFRA" "platelet derived growth factor receptor alpha" "4" "q12" "unknown" "LRG_309" "UD_144430678330" "" "" "" "1" "8803" "5156" "173490" "1" "1" "1" "0" "" "" "" "" "1" "" "" "-1" "" "-1" "00001" "2020-11-10 08:51:12" "" "" "00006" "2021-08-23 09:48:26" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00000033" "PDGFRA" "transcript variant 1" "002" "NM_006206.5" "" "NP_006197.1" "" "" "" "-339" "6245" "3270" "54229089" "54298247" "00001" "2020-11-10 08:52:04" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 2 "{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00020" "OSCC" "Oral squamous cell carcinoma" "" "" "" "" "" "00001" "2020-11-05 09:04:59" "" "" "00022" "HGSOC" "high grade serous ovarian cancer" "" "" "" "" "" "00001" "2020-11-08 09:34:16" "" "" ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{geneid}}" "{{diseaseid}}" "PDGFRA" "00020" ## Individuals ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Remarks_Non_Public}}" "{{Individual/Origin/Geographic}}" "{{Individual/Origin/Ethnic}}" "{{Individual/Origin/Population}}" "{{Individual/Gender}}" "00000146" "" "" "" "1" "" "00002" "{PMID:Nurul-Syakima Ab Mutalib et al. (2014):25404506}" "" "" "Malaysia" "" "" "F" ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{individualid}}" "{{diseaseid}}" "00000146" "00022" ## Phenotypes ## Do not remove or alter this header ## ## Note: Only showing Phenotype columns active for Diseases 00020, 00022 ## Count = 0 ## Screenings ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "0000000161" "00000146" "1" "00002" "00002" "2020-11-10 09:17:28" "" "" "SEQ-NG;PCR" "DNA" ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 1 "{{screeningid}}" "{{geneid}}" "0000000161" "PDGFRA" ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 3 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/dbSNP}}" "0000000755" "3" "10" "4" "54274888" "54274888" "subst" "0" "00002" "PDGFRA_000001" "g.54274888A>G" "9" "{PMID:Nurul-Syakima Ab Mutalib et al. (2014):25404506}{dbSNP:rs1873778}" "55141055A > G" "" "rs1873778" "0000000759" "0" "10" "4" "54285873" "54285873" "subst" "0" "00002" "PDGFRA_000002" "g.54285873C>T" "3/9" "{PMID:Nurul-Syakima Ab Mutalib et al. (2014):25404506}, {dbSNP:rs2228230}, {ClinVar:259951}" "55152040C>T" "" "rs2228230" "0000000760" "3" "10" "4" "54285873" "54285873" "subst" "0" "00002" "PDGFRA_000002" "g.54285873C>T" "1/9" "{PMID:Nurul-Syakima Ab Mutalib et al. (2014):25404506}, {dbSNP:rs2228230}, {ClinVar:259951}" "55152040C>T" "" "rs2228230" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes PDGFRA ## Count = 3 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/Exon}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Published_as}}" "{{VariantOnTranscript/GVS/Function}}" "{{VariantOnTranscript/VariantOnTranscript}}" "0000000755" "00000033" "10" "1701" "0" "1701" "0" "c.1701A>G" "" "p.(=)" "r.(=)" "" "" "{ClinVar:259949}" "0000000759" "00000033" "10" "2472" "0" "2472" "0" "c.2472C>T" "" "p.(=)" "r.(=)" "" "" "{ClinVar:259951}" "0000000760" "00000033" "10" "2472" "0" "2472" "0" "c.2472C>T" "" "p.(=)" "r.(=)" "" "" "{ClinVar:259951}" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 3 "{{screeningid}}" "{{variantid}}" "0000000161" "0000000755" "0000000161" "0000000759" "0000000161" "0000000760"