### LOVD-version 3000-290 ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = GJB1) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "GJB1" "gap junction protein beta 1" "X" "q13.1" "unknown" "LRG_245" "UD_144370877767" "" "" "" "1" "4283" "2705" "304040" "1" "1" "1" "0" "" "" "" "" "1" "" "" "-1" "" "-1" "00001" "2021-03-02 16:51:32" "" "" "00005" "2021-09-13 12:04:47" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00000354" "GJB1" "transcript variant 2" "003" "NM_000166.5" "" "NP_000157.1" "" "" "" "-146" "1508" "852" "71223206" "71225215" "00001" "2021-03-02 16:51:32" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00080" "CMT" "Charcot-Marie-Tooth disease" "" "" "" "" "" "00001" "2021-03-02 16:51:24" "" "" ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{geneid}}" "{{diseaseid}}" "GJB1" "00080" ## Individuals ## Do not remove or alter this header ## ## Count = 2 "{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Remarks_Non_Public}}" "{{Individual/Origin/Geographic}}" "{{Individual/Origin/Ethnic}}" "{{Individual/Origin/Population}}" "{{Individual/Gender}}" "00000479" "" "" "" "1" "" "00002" "{PMID:Nortina Shahrizaila et al. (2014):23649551}" "" "" "Malaysia" "Chinese" "" "M" "00000480" "" "" "" "1" "" "00002" "{PMID:Nortina Shahrizaila et al. (2014):23649551}" "" "" "Malaysia" "Chinese" "" "F" ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 2 "{{individualid}}" "{{diseaseid}}" "00000479" "00080" "00000480" "00080" ## Phenotypes ## Do not remove or alter this header ## ## Note: Only showing Phenotype columns active for Diseases 00080 ## Count = 2 "{{id}}" "{{diseaseid}}" "{{individualid}}" "{{owned_by}}" "{{Phenotype/Additional}}" "{{Phenotype/Inheritance}}" "0000000148" "00080" "00000479" "00002" "X-linked inheritance" "" "0000000149" "00080" "00000480" "00002" "X-linked inheritance" "" ## Screenings ## Do not remove or alter this header ## ## Count = 2 "{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "0000000525" "00000479" "1" "00002" "00002" "2021-03-03 15:05:34" "" "" "PCR;SEQ" "DNA" "0000000526" "00000480" "1" "00002" "00002" "2021-03-03 15:39:49" "" "" "PCR;SEQ" "DNA" ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 2 "{{screeningid}}" "{{geneid}}" "0000000525" "GJB1" "0000000526" "GJB1" ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 5 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/dbSNP}}" "0000002253" "0" "90" "X" "71223990" "71223990" "subst" "0" "00002" "GJB1_000001" "g.71223990G>A" "2/18" "{PMID:Nortina Shahrizaila et al. (2014):23649551}, {dbSNP:rs104894821}, {ClinVar:10441}" "" "" "rs104894821" "0000002254" "0" "90" "X" "71222893" "71222893" "subst" "0" "00002" "GJB1_000002" "g.71222893C>T" "1/18" "{PMID:Nortina Shahrizaila et al. (2014):23649551}" "" "" "rs144371265" "0000002255" "0" "90" "X" "71224228" "71224228" "subst" "0" "00002" "GJB1_000003" "g.71224228C>T" "1/18" "{PMID:Nortina Shahrizaila et al. (2014):23649551}, {dbSNP:rs1602349540}, {ClinVar:637224}" "" "" "rs1602349540" "0000002256" "0" "90" "X" "71223927" "71223927" "subst" "0" "00002" "GJB1_000004" "g.71223927G>A" "1/18" "{PMID:Nortina Shahrizaila et al. (2014):23649551}, {dbSNP:rs772377652}, {ClinVar:637223}" "" "" "rs772377652" "0000002257" "0" "90" "X" "71224198" "71224198" "subst" "0" "00002" "GJB1_000005" "g.71224198G>A" "1/18" "{PMID:Nortina Shahrizaila et al. (2014):23649551}{dbSNP:rs1241595912}" "" "" "rs1241595912" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes GJB1 ## Count = 5 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/Exon}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Published_as}}" "{{VariantOnTranscript/VariantOnTranscript}}" "0000002253" "00000354" "90" "283" "0" "283" "0" "c.283G>A" "" "p.(Val95Met)" "r.(?)" "" "" "0000002254" "00000354" "90" "-459" "0" "-459" "0" "c.-459C>T" "" "p.(=)" "r.(=)" "" "" "0000002255" "00000354" "90" "521" "0" "521" "0" "c.521C>T" "" "p.(Pro174Leu)" "r.(?)" "" "" "0000002256" "00000354" "90" "220" "0" "220" "0" "c.220G>A" "" "p.(Val74Met)" "r.(?)" "" "" "0000002257" "00000354" "90" "491" "0" "491" "0" "c.491G>A" "" "p.(Arg164Gln)" "r.(?)" "" "{ClinVar:543920}" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 5 "{{screeningid}}" "{{variantid}}" "0000000525" "0000002253" "0000000525" "0000002254" "0000000525" "0000002255" "0000000525" "0000002256" "0000000526" "0000002257"