### LOVD-version 3000-290 ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = GCDH) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "GCDH" "glutaryl-CoA dehydrogenase" "19" "p13.13" "unknown" "NG_009292.1" "UD_144420535325" "" "" "" "1" "4189" "2639" "608801" "1" "1" "1" "0" "" "" "" "" "1" "" "" "-1" "" "-1" "00001" "2020-11-26 09:46:29" "" "" "00006" "2021-09-12 14:59:38" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00000045" "GCDH" "transcript variant 1" "002" "NM_000159.3" "" "NP_000150.1" "" "" "" "-108" "1775" "1317" "12891129" "12899999" "00001" "2020-11-26 09:47:27" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00029" "GA1" "Glutaric aciduria type 1" "" "" "" "" "" "00001" "2020-11-26 09:46:15" "" "" ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{geneid}}" "{{diseaseid}}" "GCDH" "00029" ## Individuals ## Do not remove or alter this header ## ## Count = 2 "{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Remarks_Non_Public}}" "{{Individual/Origin/Geographic}}" "{{Individual/Origin/Ethnic}}" "{{Individual/Origin/Population}}" "{{Individual/Gender}}" "00000191" "" "" "" "1" "" "00002" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}" "" "" "Malaysia" "Chinese" "" "M" "00000192" "" "" "" "1" "" "00002" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}" "" "" "Malaysia" "Malay" "" "F" ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 2 "{{individualid}}" "{{diseaseid}}" "00000191" "00029" "00000192" "00029" ## Phenotypes ## Do not remove or alter this header ## ## Note: Only showing Phenotype columns active for Diseases 00029 ## Count = 2 "{{id}}" "{{diseaseid}}" "{{individualid}}" "{{owned_by}}" "{{Phenotype/Additional}}" "{{Phenotype/Inheritance}}" "0000000089" "00029" "00000191" "00002" "" "Familial, autosomal recessive" "0000000090" "00029" "00000192" "00002" "" "Familial, autosomal recessive" ## Screenings ## Do not remove or alter this header ## ## Count = 2 "{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "0000000206" "00000191" "1" "00002" "00002" "2020-11-26 09:53:34" "" "" "PCR;SEQ" "DNA" "0000000207" "00000192" "1" "00002" "00002" "2020-11-26 10:26:32" "" "" "PCR;SEQ" "DNA" ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 2 "{{screeningid}}" "{{geneid}}" "0000000206" "GCDH" "0000000207" "GCDH" ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 11 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/dbSNP}}" "0000000939" "0" "90" "19" "12896949" "12896949" "subst" "0" "00002" "GCDH_000001" "g.12896949G>A" "1/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs761765983}, {ClinVar:429706}" "" "" "rs761765983" "0000000940" "0" "90" "19" "12899466" "12899466" "subst" "0" "00002" "GCDH_000002" "g.12899466A>C" "1/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs199999619}, {ClinVar:193976}" "" "" "rs199999619" "0000000941" "0" "00" "19" "12897406" "12897406" "subst" "0" "00002" "GCDH_000003" "g.12897406G>A" "1/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs768925619}, {ClinVar:188946}" "" "" "rs768925619" "0000000942" "0" "90" "19" "12897788" "12897788" "subst" "0" "00002" "GCDH_000004" "g.12897788G>T" "1/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}" "" "" "rs876660106" "0000000943" "0" "00" "19" "12897409" "12897409" "subst" "0" "00002" "GCDH_000005" "g.12897409C>T" "2/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs781477694}, {ClinVar:430222}" "" "" "rs781477694" "0000000944" "0" "50" "19" "12899485" "12899485" "subst" "0" "00002" "GCDH_000006" "g.12899485G>A" "1/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs151201155}, {ClinVar:285973}" "" "" "rs151201155" "0000000945" "0" "90" "19" "12893530" "12893530" "subst" "0" "00002" "GCDH_000007" "g.12893530C>T" "1/8" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs752334462}, {ClinVar:371176}" "" "" "rs752334462" "0000000946" "0" "50" "19" "12891930" "12891930" "subst" "0" "00002" "GCDH_000008" "g.12891930A>C" "2/6" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs748185335}, {ClinVar:553050}" "" "" "rs748185335" "0000000947" "0" "90" "19" "12893540" "12893540" "subst" "0" "00002" "GCDH_000009" "g.12893540A>T" "1/6" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}" "" "" "rs1300977671" "0000000948" "0" "90" "19" "12899466" "12899466" "subst" "0" "00002" "GCDH_000002" "g.12899466A>C" "1/6" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}, {dbSNP:rs199999619}, {ClinVar:193976}" "" "" "rs199999619" "0000000949" "0" "90" "19" "12897777" "12897777" "subst" "0" "00002" "GCDH_000010" "g.12897777G>A" "2/6" "{PMID:Siti Aishah Abdul Wahab et al. (2016):27672653}" "" "" "" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes GCDH ## Count = 11 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/Exon}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Published_as}}" "{{VariantOnTranscript/GVS/Function}}" "{{VariantOnTranscript/VariantOnTranscript}}" "0000000939" "00000045" "90" "892" "0" "892" "0" "c.892G>A" "9" "p.(Ala298Thr)" "r.(?)" "" "" "{ClinVar:429706}" "0000000940" "00000045" "90" "1244" "-2" "1244" "-2" "c.1244-2A>C" "11i" "p.?" "r.spl?" "" "" "{ClinVar:193976}" "0000000941" "00000045" "00" "1060" "0" "1060" "0" "c.1060G>A" "10" "p.(Gly354Ser)" "r.(?)" "" "" "{ClinVar:188946}" "0000000942" "00000045" "90" "1168" "0" "1168" "0" "c.1168G>T" "-" "p.(Gly390Trp)" "r.(?)" "" "" "" "0000000943" "00000045" "00" "1063" "0" "1063" "0" "c.1063C>T" "-" "p.(Arg355Cys)" "r.(?)" "" "" "{ClinVar:430222}" "0000000944" "00000045" "50" "1261" "0" "1261" "0" "c.1261G>A" "" "p.(Ala421Thr)" "r.(?)" "" "" "{ClinVar:285973}" "0000000945" "00000045" "90" "382" "0" "382" "0" "c.382C>T" "" "p.(Arg128*)" "r.(?)" "" "" "{ClinVar:371176}" "0000000946" "00000045" "50" "227" "0" "227" "0" "c.227A>C" "4" "p.(Gln76Pro)" "r.(?)" "" "" "{ClinVar:553050}" "0000000947" "00000045" "90" "392" "0" "392" "0" "c.392A>T" "6" "p.(Glu131Val)" "r.(?)" "" "" "" "0000000948" "00000045" "90" "1244" "-2" "1244" "-2" "c.1244-2A>C" "11i" "p.?" "r.spl?" "" "" "{ClinVar:193976}" "0000000949" "00000045" "90" "1157" "0" "1157" "0" "c.1157G>A" "11" "p.(Arg386Gln)" "r.(?)" "" "" "" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 11 "{{screeningid}}" "{{variantid}}" "0000000206" "0000000939" "0000000206" "0000000940" "0000000206" "0000000941" "0000000206" "0000000942" "0000000206" "0000000943" "0000000206" "0000000944" "0000000206" "0000000945" "0000000207" "0000000946" "0000000207" "0000000947" "0000000207" "0000000948" "0000000207" "0000000949"