### LOVD-version 3000-290 ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = BCKDHA) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "BCKDHA" "branched chain keto acid dehydrogenase E1 subunit alpha" "19" "q13.2" "unknown" "NG_013004.1" "UD_144408646831" "" "" "" "1" "986" "593" "608348" "1" "1" "1" "0" "" "" "" "" "1" "" "" "-1" "" "-1" "00001" "2020-12-03 15:31:52" "" "" "00006" "2021-09-12 15:08:09" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00000052" "BCKDHA" "branched chain keto acid dehydrogenase E1, alpha polypeptide, transcript variant 1" "001" "NM_000709.3" "" "NP_000700.1" "" "" "" "-39" "1735" "1338" "41397789" "41425005" "00001" "2020-12-03 15:32:35" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00034" "MSUD" "maple syrup urine disease" "" "" "" "" "" "00001" "2020-12-03 15:31:35" "" "" ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{geneid}}" "{{diseaseid}}" "BCKDHA" "00034" ## Individuals ## Do not remove or alter this header ## ## Count = 3 "{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Remarks_Non_Public}}" "{{Individual/Origin/Geographic}}" "{{Individual/Origin/Ethnic}}" "{{Individual/Origin/Population}}" "{{Individual/Gender}}" "00000217" "" "" "" "1" "" "00002" "{PMID:Ernie Zuraida Ali et al. (2018):30228974}" "" "" "Malaysia" "Malay" "" "F" "00000218" "" "" "" "1" "" "00002" "{PMID:Ernie Zuraida Ali et al. (2018):30228974}" "" "" "Malaysia" "Malay" "" "M" "00000612" "" "" "" "1" "" "00004" "{PMID:Ernie Zuraida Ali et al.(2013):23729548}" "" "" "(Kuala Lumpur)" "Malay" "" "F" ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 3 "{{individualid}}" "{{diseaseid}}" "00000217" "00034" "00000218" "00034" "00000612" "00034" ## Phenotypes ## Do not remove or alter this header ## ## Note: Only showing Phenotype columns active for Diseases 00034 ## Count = 2 "{{id}}" "{{diseaseid}}" "{{individualid}}" "{{owned_by}}" "{{Phenotype/Additional}}" "{{Phenotype/Inheritance}}" "0000000103" "00034" "00000217" "00002" "" "Familial, autosomal recessive" "0000000104" "00034" "00000218" "00002" "" "Familial, autosomal recessive" ## Screenings ## Do not remove or alter this header ## ## Count = 3 "{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "0000000232" "00000217" "1" "00002" "00002" "2020-12-03 15:42:56" "" "" "PCR;SEQ" "DNA" "0000000233" "00000218" "1" "00002" "00002" "2020-12-03 16:10:15" "" "" "PCR;SEQ" "DNA" "0000000678" "00000612" "1" "00004" "00004" "2021-05-05 09:06:55" "" "" "PCR;SEQ" "DNA" ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 3 "{{screeningid}}" "{{geneid}}" "0000000232" "BCKDHA" "0000000233" "BCKDHA" "0000000678" "BCKDHA" ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 5 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/dbSNP}}" "0000001100" "0" "50" "19" "41423089" "41423089" "subst" "0" "00002" "BCKDHA_000001" "g.41423089C>T" "1/3" "{PMID:Ernie Zuraida Ali et al. (2018):30228974}, {dbSNP:rs942815730}, {ClinVar:558581}" "" "" "rs942815730" "0000001101" "0" "50" "19" "41419177" "41419177" "subst" "0" "00002" "BCKDHA_000002" "g.41419177C>T" "1/3" "{PMID:Ernie Zuraida Ali et al. (2018):30228974},{dbSNP:rs201955081},{ClinVar: 643978}" "" "" "rs201955081" "0000001102" "0" "90" "19" "41414104" "41414104" "subst" "0" "00002" "BCKDHA_000003" "g.41414104G>T" "1/3" "{PMID:Ernie Zuraida Ali et al. (2018):30228974},{dbSNP:rs398124652},{ClinVar:50863}" "" "" "rs398124652" "0000001103" "0" "50" "19" "41397941" "41397941" "subst" "0" "00002" "BCKDHA_000004" "g.41397941T>C" "1/2" "{PMID:Ernie Zuraida Ali et al.(2018):30228974}, {dbSNP:rs1600956430} ,{ClinVar: 816876}" "" "" "rs1600956430" "0000002718" "0" "90" "19" "41414104" "41414104" "subst" "0" "00004" "BCKDHA_000003" "g.41414104G>T" "" "{PMID:Ernie Zuraida Ali et al.(2013):23729548}" "" "" "rs398124652" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes BCKDHA ## Count = 5 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/Exon}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Published_as}}" "{{VariantOnTranscript/GVS/Function}}" "{{VariantOnTranscript/VariantOnTranscript}}" "0000001100" "00000052" "50" "1087" "0" "1087" "0" "c.1087C>T" "8" "p.(Arg363Trp)" "r.(?)" "" "" "{ClinVar:558581}" "0000001101" "00000052" "50" "527" "0" "527" "0" "c.527C>T" "5" "p.(Ala176Val)" "r.(?)" "" "" "{ClinVar: 643978}" "0000001102" "00000052" "90" "431" "0" "431" "0" "c.431G>T" "4" "p.(Ser144Ile)" "r.(?)" "" "" "{ClinVar:50863}" "0000001103" "00000052" "50" "108" "6" "108" "6" "c.108+6T>C" "1i" "p.(=)" "r.(=)" "" "" "{ClinVar: 816876}" "0000002718" "00000052" "90" "431" "0" "431" "0" "c.431G>T" "4" "p.(Ser144Ile)" "r.(?)" "" "" "" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 5 "{{screeningid}}" "{{variantid}}" "0000000232" "0000001100" "0000000232" "0000001101" "0000000232" "0000001102" "0000000233" "0000001103" "0000000678" "0000002718"